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  5. AT3G29100

AT3G29100 (ATVTI13, VTI13)


Aliases : ATVTI13, VTI13

Description : vesicle transport V-snare 13


Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G29100

Target Alias Description ECC score Gene Family Method Actions
Ceric.11G005300.1 ATVTI13, VTI13,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Cre13.g577500 VTI12, VTI1B, ATVTI12 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
LOC_Os01g51120.1 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Nbi_g04578 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Solyc03g115760.3.1 SGR4, ZIG1,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Zm00001e020013_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding TAS Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 26 64
No external refs found!