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  5. AT3G29260

AT3G29260


Description : NAD(P)-binding Rossmann-fold superfamily protein


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G29260
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G26770 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g015388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19543 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g14817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54448.t1 Aspi01Gene54448 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71700.t1 Aspi01Gene71700 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71702.t1 Aspi01Gene71702 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71705.t1 Aspi01Gene71705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008431 No alias not classified & original description: CDS=83-901 0.03 OrthoFinder output from all 47 species
Azfi_s0177.g056107 No alias not classified & original description: CDS=805-1623 0.05 OrthoFinder output from all 47 species
Azfi_s0474.g072982 No alias not classified & original description: CDS=1-912 0.03 OrthoFinder output from all 47 species
Azfi_s0592.g078769 No alias not classified & original description: CDS=291-1214 0.02 OrthoFinder output from all 47 species
Ceric.17G061200.1 Ceric.17G061200 not classified & original description: pacid=50617800... 0.03 OrthoFinder output from all 47 species
Dac_g09505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 OrthoFinder output from all 47 species
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033916001 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_30885 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32330 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_36105 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_40683 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g10000.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g10010.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46840.1 LOC_Os07g46840 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46852.1 LOC_Os07g46852 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46870.1 LOC_Os07g46870 Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46910.1 LOC_Os07g46910 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.03 OrthoFinder output from all 47 species
LOC_Os12g16010.1 LOC_Os12g16010 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g42773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10120560g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_107740g0010 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_289156g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_903039g0010 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_97011g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g06800.1 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp3g24700.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.02 OrthoFinder output from all 47 species
Mp6g11590.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Nbi_g25996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022913 No alias not classified & original description: CDS=1-867 0.04 OrthoFinder output from all 47 species
Solyc01g005500.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc01g091660.3.1 Solyc01g091660 Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g056710.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Zm00001e008253_P002 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0016491 oxidoreductase activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010344 seed oilbody biogenesis IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0042807 central vacuole IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA

No InterPro domains available for this sequence

No external refs found!