AT3G29360

Description : UDP-glucose 6-dehydrogenase family protein

Gene families : OG0001365 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001365_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G29360

Target	Alias	Description	ECC score	Gene Family Method
Adi_g085855	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Ala_g01833	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Ala_g33635	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aop_g05954	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene16244.t1	Aspi01Gene16244	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Azfi_s0018.g014860	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035864	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Cba_g49081	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Dac_g38505	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Dde_g02230	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Gb_18539	No alias	UDP-D-glucose 6-dehydrogenase	0.02	OrthoFinder output from all 47 species
LOC_Os03g55070.1	LOC_Os03g55070	UDP-D-glucose 6-dehydrogenase	0.06	OrthoFinder output from all 47 species
MA_65570g0010	No alias	UDP-D-glucose 6-dehydrogenase	0.02	OrthoFinder output from all 47 species
Msp_g03508	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Msp_g28528	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Nbi_g14159	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Pir_g03086	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Pir_g10775	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001250	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Solyc02g088690.4.1	Solyc02g088690	UDP-D-glucose 6-dehydrogenase	0.08	OrthoFinder output from all 47 species
Spa_g17012	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Spa_g56759	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.06	OrthoFinder output from all 47 species
Zm00001e012011_P001	Zm00001e012011	UDP-D-glucose 6-dehydrogenase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	IDA	Interproscan
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	IGI	Interproscan
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IGI	Interproscan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006007	glucose catabolic process	RCA	Interproscan
BP	GO:0006065	UDP-glucuronate biosynthetic process	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0007033	vacuole organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	None	Extended
BP	GO:0009226	nucleotide-sugar biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019320	hexose catabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
BP	GO:0046365	monosaccharide catabolic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046398	UDP-glucuronate metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0052546	cell wall pectin metabolic process	IGI	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014027	UDP-Glc/GDP-Man_DH_C	328	451
IPR014026	UDP-Glc/GDP-Man_DH_dimer	210	304
IPR001732	UDP-Glc/GDP-Man_DH_N	3	184

External Links

No external refs found!

AT3G29360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation