Description : Ribosomal protein S14p/S29e family protein
Gene families : OG0008810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008810_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G43980 | |
| Cluster | HCCA: Cluster_122 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ceric.31G071600.1 | Ceric.31G071600 | component *(uS14) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cre08.g358556 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015056001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g56241.1 | LOC_Os03g56241 | component RPS29 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os11g41610.1 | LOC_Os11g41610 | component RPS29 of SSU proteome | 0.15 | OrthoFinder output from all 47 species | |
| Mp5g15120.1 | No alias | component RPS29 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g03910.1 | No alias | component RPS29 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c14_10190V3.1 | Pp3c14_10190 | Ribosomal protein S14p/S29e family protein | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g073430.4.1 | Solyc06g073430 | component RPS29 of SSU proteome | 0.08 | OrthoFinder output from all 47 species | |
| Solyc11g020877.1.1 | Solyc11g020877 | component RPS29 of SSU proteome | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | ISS | Interproscan |
| CC | GO:0005840 | ribosome | ISS | Interproscan |
| BP | GO:0006412 | translation | ISS | Interproscan |
| CC | GO:0022627 | cytosolic small ribosomal subunit | IDA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| CC | GO:0005747 | mitochondrial respiratory chain complex I | IEP | HCCA |
| BP | GO:0006623 | protein targeting to vacuole | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0009853 | photorespiration | IEP | HCCA |
| CC | GO:0030964 | NADH dehydrogenase complex | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| BP | GO:0043094 | cellular metabolic compound salvage | IEP | HCCA |
| CC | GO:0045271 | respiratory chain complex I | IEP | HCCA |
| BP | GO:0072665 | protein localization to vacuole | IEP | HCCA |
| BP | GO:0072666 | establishment of protein localization to vacuole | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
| CC | GO:1902495 | transmembrane transporter complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| CC | GO:1990351 | transporter complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001209 | Ribosomal_S14 | 7 | 56 |
| No external refs found! |
