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  5. AT3G45150

AT3G45150 (TCP16)


Aliases : TCP16

Description : TCP domain protein 16


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G45150

Target Alias Description ECC score Gene Family Method Actions
AT1G69690 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.05 OrthoFinder output from all 47 species
AT5G08330 No alias TCP family transcription factor 0.04 OrthoFinder output from all 47 species
Adi_g060147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069116 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088075 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12872 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65051.t1 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030896 No alias TCP-type transcription factor & original description: CDS=1-1743 0.03 OrthoFinder output from all 47 species
Ceric.12G053600.1 AtTCP14, TCP14,... TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G003700.1 AtTCP14, TCP14,... TCP-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Dde_g01691 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01026145001 No alias Multi-process regulation.circadian clock.morning element... 0.03 OrthoFinder output from all 47 species
Gb_34229 AtTCP14, TCP14 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g14380.1 LOC_Os01g14380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42380.1 LOC_Os02g42380 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51280.1 LOC_Os02g51280 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Lfl_g15294 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428794g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g00471 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013125 AtTCP14, TCP14 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo441321 No alias RNA biosynthesis.transcriptional activation.TCP... 0.07 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc05g007420.2.1 Solyc05g007420 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc08g080150.1.1 Solyc08g080150 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e036117_P001 AtTCP14, TCP14,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 17 114
No external refs found!