AT3G45260

Description : C2H2-like zinc finger protein

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G45260
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00106830	IDD2, AtIDD2,...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	OrthoFinder output from all 47 species
Adi_g009975	AtIDD7, IDD7	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g060453	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g068284	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g068647	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g069013	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aev_g06786	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g18228	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g60888	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene21463.t1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene21617.t1	IDD16, AtIDD16,...	C2H2 subclass IDD transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene69376.t1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g20838	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.08G030600.1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.17G030700.1	MGP, Ceric.17G030700	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g04941	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g10682	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g17431	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01003119001	AtIDD12, IDD12	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.06	OrthoFinder output from all 47 species
GSVIVT01010283001	IDD5, AtIDD5	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.06	OrthoFinder output from all 47 species
GSVIVT01010284001	IDD4, AtIDD4	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
GSVIVT01020612001	MGP	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	OrthoFinder output from all 47 species
LOC_Os01g14010.1	MGP, LOC_Os01g14010	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os03g13400.1	IDD16, AtIDD16,...	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os09g27650.2	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os10g28330.1	MGP, LOC_Os10g28330	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Len_g17332	IDD16, AtIDD16	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g04100	MGP	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Lfl_g28185	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g30618	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
MA_10430013g0020	MGP	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Ore_g16325	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g17643	MGP	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g33896	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g27424	JKD	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g31312	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g38471	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g61845	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g65810	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g20764	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g31074	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ppi_g07601	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020376	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Solyc01g005060.3.1	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc03g121660.3.1	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc04g008500.4.1	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc06g072360.3.1	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Spa_g29211	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Tin_g30837	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e010628_P002	MGP, Zm00001e010628	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e016559_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e027791_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e034898_P001	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e035365_P003	MGP, Zm00001e035365	C2H2 zinc finger transcription factor	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	RCA	Interproscan
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	RCA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030154	cell differentiation	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004629	phospholipase C activity	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
MF	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
BP	GO:0051645	Golgi localization	IEP	HCCA
BP	GO:0051646	mitochondrion localization	IEP	HCCA
BP	GO:0060151	peroxisome localization	IEP	HCCA
BP	GO:2000071	regulation of defense response by callose deposition	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022755	Znf_C2H2_jaz	68	90

External Links

No external refs found!

AT3G45260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation