AT3G47040

Description : Glycosyl hydrolase family protein

Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G47040

Target	Alias	Description	ECC score	Gene Family Method
Aob_g35160	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene14114.t1	Aspi01Gene14114	EC_3.2 glycosylase & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene58862.t1	Aspi01Gene58862	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.23G046800.1	Ceric.23G046800	EC_3.2 glycosylase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g21660	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g13162	No alias	EC_3.2 glycosylase & original description: none	0.01	OrthoFinder output from all 47 species
LOC_Os02g03870.1	LOC_Os02g03870	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.04	OrthoFinder output from all 47 species
LOC_Os03g53790.1	LOC_Os03g53790	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.02	OrthoFinder output from all 47 species
Len_g46571	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Mp4g13480.1	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.02	OrthoFinder output from all 47 species
Msp_g21359	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g31982	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g03950	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g42137	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g10344	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36019	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g076780.3.1	Solyc06g076780	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.02	OrthoFinder output from all 47 species
Tin_g17909	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005676_P010	Zm00001e005676	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	ISS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
CC	GO:0005615	extracellular space	IEP	HCCA
BP	GO:0007623	circadian rhythm	IEP	HCCA
MF	GO:0008083	growth factor activity	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
MF	GO:0030545	signaling receptor regulator activity	IEP	HCCA
MF	GO:0030546	signaling receptor activator activity	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
MF	GO:0048018	receptor ligand activity	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002772	Glyco_hydro_3_C	419	630
IPR001764	Glyco_hydro_3_N	29	382

External Links

No external refs found!

AT3G47040

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation