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  5. AT3G47720

AT3G47720 (SRO4)


Aliases : SRO4

Description : similar to RCD one 4


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47720
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Adi_g008312 SRO3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009409 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Adi_g112117 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g09852 SRO2 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.15G016700.1 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.15G016800.1 SRO2, Ceric.15G016800 organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01007754001 SRO5 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.04 OrthoFinder output from all 47 species
Gb_33339 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.04 OrthoFinder output from all 47 species
MA_10426389g0010 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
MA_10426389g0020 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Pnu_g25860 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g01011 AtRCD1, RCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114360.4.1 SRO5, Solyc03g114360 Probable inactive poly [ADP-ribose] polymerase SRO5... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009823 cytokinin catabolic process IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042447 hormone catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 244 309
No external refs found!