1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G48020

AT3G48020


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48020
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Aev_g27641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17146.t1 Aspi01Gene17146 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17148.t1 Aspi01Gene17148 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44143.t1 Aspi01Gene44143 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007791001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_01380 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_19812 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g40268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_670206g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_68645g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_80489g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016721 No alias not classified & original description: CDS=1-624 0.04 OrthoFinder output from all 47 species
Solyc05g039960.1.1 Solyc05g039960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g071370.1.1 Solyc06g071370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030876_P001 Zm00001e030876 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0010232 vascular transport IEP HCCA
BP GO:0010233 phloem transport IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010350 cellular response to magnesium starvation IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010726 positive regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010728 regulation of hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0010729 positive regulation of hydrogen peroxide biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0018008 N-terminal peptidyl-glycine N-myristoylation IEP HCCA
BP GO:0018201 peptidyl-glycine modification IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031111 negative regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031113 regulation of microtubule polymerization IEP HCCA
BP GO:0031114 regulation of microtubule depolymerization IEP HCCA
BP GO:0031115 negative regulation of microtubule polymerization IEP HCCA
BP GO:0031117 positive regulation of microtubule depolymerization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032026 response to magnesium ion IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0034486 vacuolar transmembrane transport IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0035865 cellular response to potassium ion IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043325 phosphatidylinositol-3,4-bisphosphate binding IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0051511 negative regulation of unidimensional cell growth IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071280 cellular response to copper ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0071286 cellular response to magnesium ion IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071325 cellular response to mannitol stimulus IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
BP GO:0072708 response to sorbitol IEP HCCA
BP GO:0072709 cellular response to sorbitol IEP HCCA
BP GO:0075733 intracellular transport of virus IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0090414 molybdate ion export from vacuole IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901881 positive regulation of protein depolymerization IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903426 regulation of reactive oxygen species biosynthetic process IEP HCCA
BP GO:1903428 positive regulation of reactive oxygen species biosynthetic process IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:2000379 positive regulation of reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!