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  5. AT3G49930

AT3G49930


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49930
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT2G28200 No alias C2H2-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT5G61470 No alias C2H2-like zinc finger protein 0.02 OrthoFinder output from all 47 species
Adi_g055671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04561.t1 Aspi01Gene04561 regulatory protein *(DAZ) of male germ cell division &... 0.04 OrthoFinder output from all 47 species
Ceric.07G098000.1 Ceric.07G098000 regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Dac_g09867 No alias regulatory protein *(DAZ) of male germ cell division &... 0.04 OrthoFinder output from all 47 species
Gb_40151 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g32220.1 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g32230.1 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_10426425g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_70076g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_922988g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g27134 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Pir_g31128 ZAT10, STZ C2H2-type subclass ZAT transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g48975 No alias C2H2-type subclass ZAT transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006193 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Spa_g46547 No alias regulatory protein *(DAZ) of male germ cell division &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription RCA Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!