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  5. AT3G50360

AT3G50360 (CEN2, CEN1, ATCEN2)


Aliases : CEN2, CEN1, ATCEN2

Description : centrin2


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50360
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Aop_g33333 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0246.g060027 CEN2 calcium sensor *(CML) & original description: CDS=1-480 0.04 OrthoFinder output from all 47 species
Solyc04g026350.3.1 CEN2, CEN1,... DNA repair protein (CEN2). centrin component CEN of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0030048 actin filament-based movement RCA Interproscan
BP GO:0051645 Golgi localization RCA Interproscan
BP GO:0051646 mitochondrion localization RCA Interproscan
BP GO:0060151 peroxisome localization RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015865 purine nucleotide transport IEP HCCA
BP GO:0015867 ATP transport IEP HCCA
BP GO:0015868 purine ribonucleotide transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0051503 adenine nucleotide transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 26 88
IPR002048 EF_hand_dom 99 162
No external refs found!