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AT3G50510 (LBD28)


Aliases : LBD28

Description : LOB domain-containing protein 28


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50510

Target Alias Description ECC score Gene Family Method Actions
AT1G06280 LBD2 LOB domain-containing protein 2 0.04 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT1G72980 LBD7 LOB domain-containing protein 7 0.06 OrthoFinder output from all 47 species
AT3G03760 LBD20 LOB domain-containing protein 20 0.04 OrthoFinder output from all 47 species
AT3G47870 LBD27, SCP LOB domain-containing protein 27 0.11 OrthoFinder output from all 47 species
AT5G63090 LOB Lateral organ boundaries (LOB) domain family protein 0.05 OrthoFinder output from all 47 species
Adi_g052431 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113714 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00489 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70670 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G046200.1 AS2, Ceric.34G046200 AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.36G053800.1 LBD15, ASL11,... AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g20332 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29091 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12391 LBD25 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018486001 ASL1, LBD36 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01032592001 LBD27, SCP RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
Gb_40767 LBD15, ASL11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g56530.1 LBD20, LOC_Os01g56530 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g41600.1 ASL1, LBD36,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Pnu_g22342 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g087570.1.1 LBD27, SCP,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 12 109
No external refs found!