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  5. AT3G51080

AT3G51080 (GATA6)


Aliases : GATA6

Description : GATA transcription factor 6


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G51080
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Adi_g010897 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043911 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02207 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14443 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16772 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32134 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14739 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26996 GATA23 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12583 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22142.t1 BME3-ZF, BME3,... transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36695 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G042500.1 GATA22, CGA1,... transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g06438 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07483 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20454 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_34949 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18616g0010 GATA9 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Nbi_g01153 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22942 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43293 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02097 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06282 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54359 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015681 GATA12 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Smo440037 GNC, GATA21 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Spa_g29134 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009416 response to light stimulus IEP Interproscan
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Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010058 regulation of atrichoblast fate specification IEP HCCA
BP GO:0010059 positive regulation of atrichoblast fate specification IEP HCCA
BP GO:0010061 regulation of trichoblast fate specification IEP HCCA
BP GO:0010063 positive regulation of trichoblast fate specification IEP HCCA
BP GO:0010071 root meristem specification IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010455 positive regulation of cell fate commitment IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042659 regulation of cell fate specification IEP HCCA
BP GO:0042660 positive regulation of cell fate specification IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:1903888 regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1903890 positive regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1905421 regulation of plant organ morphogenesis IEP HCCA
BP GO:2000067 regulation of root morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 223 257
No external refs found!