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AT3G52460


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G52460
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00244400 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00030p00215650 NHL3,... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00216100 NHL10, YLS9,... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00140p00027980 evm_27.TU.AmTr_v1... Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT3G52470 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT5G06330 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13476 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29590 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05265.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05267.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G026900.1 NHL25, Ceric.30G026900 not classified & original description: pacid=50608145... 0.05 OrthoFinder output from all 47 species
Ceric.39G045900.1 Ceric.39G045900 not classified & original description: pacid=50583407... 0.03 OrthoFinder output from all 47 species
Dcu_g06112 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_01957 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27244 NHL12 NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g09880.1 LOC_Os01g09880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g39290.1 LOC_Os01g39290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g33550.1 LOC_Os02g33550 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33990.1 LOC_Os04g33990 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58850.1 NHL10, YLS9,... NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g01220.1 LOC_Os08g01220 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g23460.1 LOC_Os08g23460 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os09g09460.1 LOC_Os09g09460 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
LOC_Os10g39970.1 LOC_Os10g39970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06260.1 LOC_Os12g06260 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_100525g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10432342g0020 NHL3 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433706g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10436644g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_83110g0010 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g19740.1 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g07630.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g36424 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36425 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38841 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g007240.3.1 NHL2, Solyc01g007240 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc01g009160.2.1 Solyc01g009160 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc02g081450.2.1 Solyc02g081450 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g054250.2.1 Solyc07g054250 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g150145.1.1 NHL1, Solyc10g150145 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g095980.2.1 Solyc12g095980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g00670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e009221_P001 Zm00001e009221 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009420_P001 Zm00001e009420 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e019181_P001 NHL3, Zm00001e019181 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029112_P001 Zm00001e029112 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039408_P001 Zm00001e039408 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e040847_P001 Zm00001e040847 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
CC GO:0051286 cell tip IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA

No InterPro domains available for this sequence

No external refs found!