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AT3G52470


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G52470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00083450 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AT1G61760 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AT3G52460 No alias hydroxyproline-rich glycoprotein family protein 0.02 OrthoFinder output from all 47 species
AT5G06320 NHL3 NDR1/HIN1-like 3 0.05 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08421 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05231.t2 Aspi01Gene05231 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05250.t1 NHL10, YLS9,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene05257.t2 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05258.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05259.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05260.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05265.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05266.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05268.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05269.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59729 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G050300.1 NHL25, Ceric.09G050300 not classified & original description: pacid=50587664... 0.02 OrthoFinder output from all 47 species
Ceric.11G017200.1 Ceric.11G017200 not classified & original description: pacid=50596641... 0.03 OrthoFinder output from all 47 species
Ceric.16G075400.1 Ceric.16G075400 not classified & original description: pacid=50589266... 0.1 OrthoFinder output from all 47 species
Ceric.30G027000.1 NHL25, Ceric.30G027000 not classified & original description: pacid=50608290... 0.04 OrthoFinder output from all 47 species
Dac_g21088 NHL10, YLS9, ATNHL10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06112 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01957 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_26587 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26590 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_27157 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64450.1 LOC_Os01g64450 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64480.1 LOC_Os01g64480 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33550.1 LOC_Os02g33550 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g33990.1 LOC_Os04g33990 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58090.1 LOC_Os04g58090 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os05g11010.1 LOC_Os05g11010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g06260.1 LOC_Os12g06260 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g19832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432342g0020 NHL3 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_63890g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_71687g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7708687g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp8g07630.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g09290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06486 NHL25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g46791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g081450.2.1 Solyc02g081450 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g019920.1.1 Solyc03g019920 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g121620.1.1 Solyc03g121620 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc11g069970.1.1 Solyc11g069970 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g11878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002284_P001 Zm00001e002284 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009221_P001 Zm00001e009221 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012610_P001 Zm00001e012610 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e014749_P001 Zm00001e014749 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e019498_P001 Zm00001e019498 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029112_P001 Zm00001e029112 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e035148_P001 Zm00001e035148 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e039408_P001 Zm00001e039408 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e040847_P001 Zm00001e040847 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041974_P001 Zm00001e041974 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041977_P001 Zm00001e041977 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 73 176
No external refs found!