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  5. AT3G52550

AT3G52550


Description : BEST Arabidopsis thaliana protein match is: ovate family protein 18 (TAIR:AT3G52540.1); Has 5496 Blast hits to 1338 proteins in 151 species: Archae - 0; Bacteria - 23; Metazoa - 3754; Fungi - 379; Plants - 301; Viruses - 154; Other Eukaryotes - 885 (source: NCBI BLink).


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G52550
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00238760 OFP14, ATOFP14,... RNA biosynthesis.transcriptional activation.OFP... 0.05 OrthoFinder output from all 47 species
AMTR_s00078p00189070 OFP12, ATOFP12,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00026640 OFP8, ATOFP8,... RNA biosynthesis.transcriptional activation.OFP... 0.04 OrthoFinder output from all 47 species
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.04 OrthoFinder output from all 47 species
AT4G04025 No alias No description available 0.06 OrthoFinder output from all 47 species
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.06 OrthoFinder output from all 47 species
Adi_g075269 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18435 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g34589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40639 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04698 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25921 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05059 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08880 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15600 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09357 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32425.t1 Aspi01Gene32425 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32428.t1 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40775.t1 ATOFP10, OFP10,... transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42861.t2 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58205.t1 OFP8, ATOFP8,... transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60216.t1 Aspi01Gene60216 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16868 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G069100.1 Ceric.05G069100 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G015200.1 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original... 0.06 OrthoFinder output from all 47 species
Ceric.18G010500.1 Ceric.18G010500 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g23053 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28603 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34037 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25347 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03668 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18359 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017105001 OFP14, ATOFP14 RNA biosynthesis.transcriptional activation.OFP... 0.04 OrthoFinder output from all 47 species
Gb_20898 ATOFP6, OFP6 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Gb_22142 OFP4, ATOFP4 transcription factor (OFP) 0.05 OrthoFinder output from all 47 species
LOC_Os01g64410.1 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os03g06350.1 OFP11, atofp11,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g37510.1 OFP8, ATOFP8,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g48830.1 ATOFP3, OFP3,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g25910.1 ATOFP1, OFP1,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os05g36990.1 ATOFP7, OFP7,... transcription factor (OFP) 0.06 OrthoFinder output from all 47 species
LOC_Os05g39950.1 OFP4, ATOFP4,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g48150.1 ATOFP7, OFP7,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os08g01190.1 OFP18, ATOFP18,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
LOC_Os10g38880.1 OFP8, ATOFP8,... transcription factor (OFP) 0.06 OrthoFinder output from all 47 species
Lfl_g08126 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17910 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_31710g0010 ATOFP3, OFP3 transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
MA_798051g0010 ATOFP5, OFP5 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Msp_g24386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31353 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03475 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45041 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12951 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14650 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31234 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006202 No alias transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021192 OFP2, ATOFP2 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g49665 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g085500.4.1 Solyc02g085500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g055220.1.1 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Solyc06g082460.1.1 OFP4, ATOFP4,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Solyc11g006670.1.1 ATOFP13, OFP13,... transcription factor (OFP) 0.05 OrthoFinder output from all 47 species
Spa_g11861 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30376 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48011 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54739 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11158 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25338 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32323 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g38119 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016408_P001 ATOFP7, OFP7,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e025928_P001 Zm00001e025928 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e033910_P001 OFP14, ATOFP14,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
MF GO:0016207 4-coumarate-CoA ligase activity IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!