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  5. AT3G53450

AT3G53450


Description : Putative lysine decarboxylase family protein


Gene families : OG0000622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00146150 evm_27.TU.AmTr_v1... Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
AT5G03270 No alias lysine decarboxylase family protein 0.04 OrthoFinder output from all 47 species
Als_g52625 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69230.t1 Aspi01Gene69230 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10138 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g16477 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Dde_g03712 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01009880001 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
GSVIVT01032119001 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
LOC_Os01g51210.1 LOC_Os01g51210 cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
LOC_Os03g64070.1 LOC_Os03g64070 cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
LOC_Os04g43840.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Lfl_g10038 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
MA_925g0020 No alias cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Msp_g39261 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Msp_g43815 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Pir_g30036 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Sam_g17123 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Spa_g01666 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
Spa_g54738 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0031624 ubiquitin conjugating enzyme binding IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
MF GO:0044390 ubiquitin-like protein conjugating enzyme binding IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046621 negative regulation of organ growth IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031100 LOG_fam 58 188
No external refs found!