AT3G53600

Description : C2H2-type zinc finger family protein

Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G53600
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AT1G27730	ZAT10, STZ	salt tolerance zinc finger	0.03	OrthoFinder output from all 47 species
AT2G28710	No alias	C2H2-type zinc finger family protein	0.04	OrthoFinder output from all 47 species
AT2G37430	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.04	OrthoFinder output from all 47 species
AT3G46090	ZAT7	C2H2 and C2HC zinc fingers superfamily protein	0.04	OrthoFinder output from all 47 species
AT4G35610	No alias	zinc finger (C2H2 type) family protein	0.04	OrthoFinder output from all 47 species
AT4G35700	No alias	zinc finger (C2H2 type) family protein	0.04	OrthoFinder output from all 47 species
AT5G59820	RHL41, ZAT12	C2H2-type zinc finger family protein	0.03	OrthoFinder output from all 47 species
AT5G67450	AZF1, ZF1	zinc-finger protein 1	0.04	OrthoFinder output from all 47 species
Adi_g055671	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20065	AZF2, ZF2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g51311	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g02284	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene04561.t1	Aspi01Gene04561	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene47315.t1	Aspi01Gene47315	regulatory protein *(DAZ) of male germ cell division &...	0.04	OrthoFinder output from all 47 species
Cba_g37408	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Ceric.30G035900.1	Ceric.30G035900	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Dac_g07569	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Dde_g24320	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
GSVIVT01023887001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
GSVIVT01037851001	AZF1, ZF1	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
Gb_06484	AZF1, ZF1	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Gb_06485	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Gb_10419	No alias	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os01g62130.1	LOC_Os01g62130	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os02g44120.1	LOC_Os02g44120	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os03g17150.1	LOC_Os03g17150	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os03g32220.1	CZF2, ZAT6,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os03g60570.1	LOC_Os03g60570	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os05g02390.1	RHL41, ZAT12,...	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os10g40660.1	LOC_Os10g40660	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os11g47630.1	LOC_Os11g47630	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Len_g26412	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g29411	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Lfl_g22314	No alias	C2H2-type subclass ZAT transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g28757	No alias	C2H2-type subclass ZAT transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g37210	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
MA_109421g0010	No alias	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
MA_167434g0010	No alias	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
MA_837209g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_85675g0010	No alias	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Msp_g25888	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Pir_g23648	No alias	C2H2-type subclass ZAT transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ppi_g03954	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g088670.1.1	Solyc02g088670	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc05g054650.1.1	Solyc05g054650	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Solyc06g074800.1.1	Solyc06g074800	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Solyc06g075780.3.1	Solyc06g075780	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Solyc08g078590.1.1	Solyc08g078590	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc09g008440.1.1	Solyc09g008440	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Solyc12g088400.1.1	Solyc12g088400	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Spa_g18361	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Spa_g37939	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Tin_g08659	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Zm00001e001253_P001	Zm00001e001253	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e002344_P001	Zm00001e002344	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e006181_P001	Zm00001e006181	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e006184_P001	Zm00001e006184	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e019350_P001	Zm00001e019350	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e023551_P001	Zm00001e023551	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e028782_P001	Zm00001e028782	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e029605_P001	RHL41, ZAT12,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e038464_P001	Zm00001e038464	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002679	respiratory burst involved in defense response	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEP	Interproscan
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045730	respiratory burst	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
CC	GO:0009986	cell surface	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G53600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation