AT3G54550


Description : Protein of unknown function (DUF506)


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54550

Target Alias Description ECC score Gene Family Method Actions
Adi_g056039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28362 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.01G086300.1 Ceric.01G086300 not classified & original description: pacid=50591934... 0.01 OrthoFinder output from all 47 species
Ceric.27G003000.1 Ceric.27G003000 not classified & original description: pacid=50605227... 0.02 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.01 OrthoFinder output from all 47 species
LOC_Os02g48850.1 LOC_Os02g48850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g01300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 62 271
No external refs found!