AT3G55500 (EXPA16, ATHEXP ALPHA...)


Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16

Description : expansin A16


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55500

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00063420 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 OrthoFinder output from all 47 species
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.01 OrthoFinder output from all 47 species
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 OrthoFinder output from all 47 species
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 OrthoFinder output from all 47 species
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 OrthoFinder output from all 47 species
AT4G17030 ATHEXP BETA 3.1,... expansin-like B1 0.03 OrthoFinder output from all 47 species
AT5G05290 EXPA2, ATHEXP... expansin A2 0.02 OrthoFinder output from all 47 species
Adi_g096188 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26309 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Als_g15347 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g13184 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21879 ATEXPA10,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21880 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21881 ATEXPA11, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30155 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g36017 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g44449 ATEXPA10,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14337.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene56575.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0117.g046537 EXP15, ATEXPA15,... alpha-class expansin & original description: CDS=74-868 0.02 OrthoFinder output from all 47 species
Cba_g00646 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08546 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g09346 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g10261 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15610 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16993 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16994 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40575 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06200 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11792 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01899 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16058 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16061 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31254 EXPB1, ATEXPB1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007987001 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
GSVIVT01024572001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
Gb_01500 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Gb_01502 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Gb_01505 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_07424 EXP15, ATEXPA15,... alpha-class expansin 0.06 OrthoFinder output from all 47 species
Gb_07439 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Gb_29324 ATEXLA1, EXPL1,... alpha-like-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os01g14660.1 ATHEXP ALPHA... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g16730.1 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os03g06050.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g31480.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g46650.1 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g01920.1 ATEXP7, EXPA7,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g30330.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g30340.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g39110.1 ATEXP7, EXPA7,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40730.1 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Lfl_g39394 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_100868g0010 EXPA8, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
MA_86877g0010 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp2g18600.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp5g01930.1 EXPA6, ATEXP6,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g37017 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05268 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g07847 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g20452 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g32683 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=682-1482 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009901 ATEXPA10,... alpha-class expansin & original description: CDS=444-1193 0.01 OrthoFinder output from all 47 species
Sam_g47903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo230202 EXPA2, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
Smo409954 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Solyc04g081870.4.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Spa_g38499 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002243_P002 ATEXLA3, EXPL3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017221_P001 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e036860_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006949 syncytium formation IEP Interproscan
BP GO:0009826 unidimensional cell growth ISS Interproscan
BP GO:0009826 unidimensional cell growth NAS Interproscan
BP GO:0009828 plant-type cell wall loosening ISS Interproscan
BP GO:0009828 plant-type cell wall loosening NAS Interproscan
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 167 244
IPR009009 RlpA-like_DPBB 69 156
No external refs found!