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  5. AT3G56500

AT3G56500


Description : serine-rich protein-related


Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G56500
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00172620 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14239.t1 Aspi01Gene14239 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g30520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04477 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_75170g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006493 protein O-linked glycosylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!