AT3G57500


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001567 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001567_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G57500

Target Alias Description ECC score Gene Family Method Actions
Ceric.18G031500.1 Ceric.18G031500 not classified & original description: pacid=50621765... 0.04 OrthoFinder output from all 47 species
Ehy_g03210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012242_P001 Zm00001e012242 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005697 telomerase holoenzyme complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
CC GO:0009508 plastid chromosome IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032205 negative regulation of telomere maintenance IEP HCCA
BP GO:0032210 regulation of telomere maintenance via telomerase IEP HCCA
BP GO:0032211 negative regulation of telomere maintenance via telomerase IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1904356 regulation of telomere maintenance via telomere lengthening IEP HCCA
BP GO:1904357 negative regulation of telomere maintenance via telomere lengthening IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000278 regulation of DNA biosynthetic process IEP HCCA
BP GO:2000279 negative regulation of DNA biosynthetic process IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!