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  5. AT3G58000

AT3G58000


Description : VQ motif-containing protein


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58000

Target Alias Description ECC score Gene Family Method Actions
Adi_g104547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38883 No alias WRKY33-activating protein *(SIB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g40085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12674.t1 Aspi01Gene12674 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72262.t1 Aspi01Gene72262 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46858 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G025800.1 Ceric.10G025800 not classified & original description: pacid=50611640... 0.07 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.04 OrthoFinder output from all 47 species
Dac_g45144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01033500001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_37467 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_40688 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010042 No alias not classified & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.04 OrthoFinder output from all 47 species
Spa_g01899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03437 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0009554 megasporogenesis IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048533 sporocyte differentiation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 37 63
No external refs found!