Pnu_g30538


Description : not classified & original description: none


Gene families : OG0000005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30538

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00174p00032480 CYP71A22,... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 OrthoFinder output from all 47 species
Als_g32541 CYP93D1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Ceric.16G057600.1 CYP76C5, Ceric.16G057600 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
LOC_Os04g01140.1 CYP93D1, LOC_Os04g01140 Cytochrome P450 93G1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os09g27510.1 CYP76C4, LOC_Os09g27510 Oryzalexin D synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os12g16720.1 CYP71B2, LOC_Os12g16720 no description available(sp|q2quc5|c71p1_orysj : 961.0)... 0.02 OrthoFinder output from all 47 species
MA_105414g0010 CYP75B1, D501, TT7 Cytochrome P450 750A1 OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_831297g0010 CYP76C4 Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 OrthoFinder output from all 47 species
Mp7g08020.1 CYP75B1, D501, TT7 Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 OrthoFinder output from all 47 species
Msp_g20418 CYP71A12 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Nbi_g29779 CYP706A4 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Pir_g10829 CYP98A3 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Solyc02g092250.3.1 CYP71B34, Solyc02g092250 Premnaspirodiene oxygenase OS=Hyoscyamus muticus... 0.04 OrthoFinder output from all 47 species
Solyc04g011680.3.1 CYP71B10, Solyc04g011680 Cytochrome P450 CYP736A12 OS=Panax ginseng... 0.03 OrthoFinder output from all 47 species
Spa_g24161 CYP75B1, D501, TT7 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Spa_g40511 CYP75B1, D501, TT7 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Zm00001e001037_P001 CYP76C1, Zm00001e001037 Geraniol 8-hydroxylase OS=Swertia mussotii... 0.02 OrthoFinder output from all 47 species
Zm00001e009891_P002 CYP75B1, D501,... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 OrthoFinder output from all 47 species
Zm00001e022868_P001 CYP75B1, D501,... Flavonoid 3-monooxygenase CYP75B3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e039532_P001 CYP71B34, Zm00001e039532 no description available(sp|q2quc5|c71p1_orysj : 845.0)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!