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  5. AT3G60090

AT3G60090


Description : VQ motif-containing protein


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G60090

Target Alias Description ECC score Gene Family Method Actions
Ala_g27858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58865.t1 Aspi01Gene58865 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58866.t1 Aspi01Gene58866 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G046300.1 Ceric.18G046300 not classified & original description: pacid=50621121... 0.06 OrthoFinder output from all 47 species
Dcu_g16494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430605g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_158473g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g09843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g03596 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g24720 No alias WRKY33-activaTing protein *(SIB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030507_P001 Zm00001e030507 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0009620 response to fungus IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 50 75
No external refs found!