Aliases : AtBECLIN1, ATATG6, ATG6, BECLIN1
Description : AUTOPHAGY 6
Gene families : OG0004790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004790_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G61710 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ehy_g01420 | AtBECLIN1,... | regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g44200.1 | AtBECLIN1,... | regulatory component VPS30/ATG6 of PI3-kinase vesicle... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g01699 | AtBECLIN1,... | regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013032 | AtBECLIN1,... | regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018799_P002 | AtBECLIN1,... | regulatory component VPS30/ATG6 of PI3-kinase vesicle... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000045 | autophagosome assembly | IGI | Interproscan |
| CC | GO:0000407 | phagophore assembly site | IDA | Interproscan |
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0006623 | protein targeting to vacuole | IGI | Interproscan |
| BP | GO:0006914 | autophagy | ISS | Interproscan |
| CC | GO:0009507 | chloroplast | ISM | Interproscan |
| BP | GO:0009845 | seed germination | IDA | Interproscan |
| BP | GO:0009846 | pollen germination | IMP | Interproscan |
| BP | GO:0050832 | defense response to fungus | IEP | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003837 | beta-ureidopropionase activity | IEP | HCCA |
| MF | GO:0004806 | triglyceride lipase activity | IEP | HCCA |
| CC | GO:0005615 | extracellular space | IEP | HCCA |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | HCCA |
| BP | GO:0006208 | pyrimidine nucleobase catabolic process | IEP | HCCA |
| BP | GO:0006212 | uracil catabolic process | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
| MF | GO:0016298 | lipase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019860 | uracil metabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0019900 | kinase binding | IEP | HCCA |
| MF | GO:0019901 | protein kinase binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| MF | GO:0043424 | protein histidine kinase binding | IEP | HCCA |
| BP | GO:0043562 | cellular response to nitrogen levels | IEP | HCCA |
| BP | GO:0046113 | nucleobase catabolic process | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR040455 | Atg6_BARA | 301 | 476 |
| No external refs found! |
