AT3G62050


Description : Putative endonuclease or glycosyl hydrolase


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62050

Target Alias Description ECC score Gene Family Method Actions
AT3G62850 No alias zinc finger protein-related 0.06 OrthoFinder output from all 47 species
Aev_g08983 EDA32 endoribonuclease *(MNU) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23291 EDA32 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g06680.2 LOC_Os11g06680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06560.1 LOC_Os12g06560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g10988 EDA32 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo113855 EDA32 No description available 0.03 OrthoFinder output from all 47 species
Spa_g13107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010025 wax biosynthetic process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010166 wax metabolic process IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 14 132
No external refs found!