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  5. Pnu_g30567

Pnu_g30567


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30567

Target Alias Description ECC score Gene Family Method Actions
Adi_g022185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.04 OrthoFinder output from all 47 species
Cba_g14713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.04 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 67
No external refs found!