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  5. AT3G62290

AT3G62290 (ARFA1E, ATARFA1E)


Aliases : ARFA1E, ATARFA1E

Description : ADP-ribosylation factor A1E


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62290

Target Alias Description ECC score Gene Family Method Actions
Adi_g003699 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051594 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110620 ATARFA1F, ARFA1F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112037 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07015 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30565 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31131 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07700 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03710 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06881 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31560 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g49446 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G047200.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.21 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Dcu_g07952 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30050 No alias ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_07323 ARFA1E, ATARFA1E ARF-GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os01g59790.2 ATARFA1F,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os05g41060.1 ATARFA1F,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Lfl_g04441 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23069 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_101085g0010 ARFA1E, ATARFA1E ARF-GTPase 0.02 OrthoFinder output from all 47 species
Mp3g13920.1 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Nbi_g15523 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15667 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40990 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06024 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g008000.3.1 ATARFA1B,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
Solyc12g099080.3.1 ARFA1E,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e031984_P002 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
MF GO:0005525 GTP binding TAS Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0006499 N-terminal protein myristoylation IDA Interproscan
BP GO:0006499 N-terminal protein myristoylation RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
MF GO:0016004 phospholipase activator activity TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000306 obsolete extrinsic component of vacuolar membrane IEP HCCA
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0010008 endosome membrane IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 177
No external refs found!