AT3G62410 (CP12, CP12-2)

Aliases : CP12, CP12-2

Description : CP12 domain-containing protein 2

Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G62410

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00175560	CP12, CP12-2,...	Calvin cycle protein CP12-2, chloroplastic...	0.04	OrthoFinder output from all 47 species
Adi_g048511	CP12-1, CP12	regulatory protein *(CP12) of GAPDH activity & original...	0.04	OrthoFinder output from all 47 species
Ala_g00257	CP12, CP12-2	regulatory protein *(CP12) of GAPDH activity & original...	0.03	OrthoFinder output from all 47 species
Aob_g00251	CP12, CP12-2	regulatory protein *(CP12) of GAPDH activity & original...	0.03	OrthoFinder output from all 47 species
Aop_g10777	CP12, CP12-2	regulatory protein *(CP12) of GAPDH activity & original...	0.03	OrthoFinder output from all 47 species
Ceric.15G075300.1	CP12, CP12-2,...	regulatory protein *(CP12) of GAPDH activity & original...	0.03	OrthoFinder output from all 47 species
Dac_g12215	CP12, CP12-2	regulatory protein *(CP12) of GAPDH activity & original...	0.02	OrthoFinder output from all 47 species
Dcu_g22530	CP12-3	regulatory protein *(CP12) of GAPDH activity & original...	0.04	OrthoFinder output from all 47 species
Dcu_g40442	CP12, CP12-2	regulatory protein *(CP12) of GAPDH activity & original...	0.04	OrthoFinder output from all 47 species
Dde_g03082	CP12, CP12-2	regulatory protein *(CP12) of GAPDH activity & original...	0.02	OrthoFinder output from all 47 species
Ehy_g17531	CP12-3	regulatory protein *(CP12) of GAPDH activity & original...	0.02	OrthoFinder output from all 47 species
MA_524595g0010	CP12, CP12-2	Calvin cycle protein CP12-2, chloroplastic...	0.03	OrthoFinder output from all 47 species
Ore_g08879	CP12-1, CP12	regulatory protein *(CP12) of GAPDH activity & original...	0.02	OrthoFinder output from all 47 species
Ore_g22166	CP12-1, CP12	regulatory protein *(CP12) of GAPDH activity & original...	0.02	OrthoFinder output from all 47 species
Spa_g00117	CP12-1, CP12	regulatory protein *(CP12) of GAPDH activity & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009416	response to light stimulus	IEP	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009570	chloroplast stroma	ISS	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	RCA	Interproscan
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	IEP	Interproscan
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0010110	regulation of photosynthesis, dark reaction	None	Extended
BP	GO:0010114	response to red light	RCA	Interproscan
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0010218	response to far red light	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0018149	peptide cross-linking	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018198	peptidyl-cysteine modification	None	Extended
BP	GO:0018316	peptide cross-linking via L-cystine	TAS	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019253	reductive pentose-phosphate cycle	TAS	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019685	photosynthesis, dark reaction	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034059	response to anoxia	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0034605	cellular response to heat	IEP	Interproscan
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0043269	regulation of monoatomic ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045912	negative regulation of carbohydrate metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070417	cellular response to cold	IEP	Interproscan
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071454	cellular response to anoxia	IEP	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080152	regulation of reductive pentose-phosphate cycle	None	Extended
BP	GO:0080153	negative regulation of reductive pentose-phosphate cycle	IDA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	None	Extended
BP	GO:1905156	negative regulation of photosynthesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003823	CP12_dom	60	130

External Links

No external refs found!

AT3G62410 (CP12, CP12-2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation