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  5. AT3G62850

AT3G62850


Description : zinc finger protein-related


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62850

Target Alias Description ECC score Gene Family Method Actions
AT3G56730 No alias Putative endonuclease or glycosyl hydrolase 0.04 OrthoFinder output from all 47 species
AT3G61028 No alias Putative endonuclease or glycosyl hydrolase 0.05 OrthoFinder output from all 47 species
AT3G62050 No alias Putative endonuclease or glycosyl hydrolase 0.06 OrthoFinder output from all 47 species
AT5G61180 No alias Putative endonuclease or glycosyl hydrolase 0.07 OrthoFinder output from all 47 species
Lfl_g18383 EDA32 endoribonuclease *(MNU) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009652 thigmotropism IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 15 148
IPR021139 NYN_MARF1 240 366
No external refs found!