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  5. AT4G01700

AT4G01700


Description : Chitinase family protein


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01700
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.09 OrthoFinder output from all 47 species
AMTR_s00001p00243570 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.07 OrthoFinder output from all 47 species
AMTR_s00001p00243680 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
AMTR_s00001p00243780 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
AMTR_s00045p00134660 evm_27.TU.AmTr_v1... Chitinase 10 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
AMTR_s00066p00199730 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
AT1G02360 No alias Chitinase family protein 0.06 OrthoFinder output from all 47 species
AT2G43580 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT2G43590 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
Aev_g06392 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18092 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23821.t1 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32099.t1 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32150.t1 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000746 ATEP3, EP3,... not classified & original description: CDS=491-1327 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000750 ATEP3, EP3,... not classified & original description: CDS=1-942 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000759 No alias not classified & original description: CDS=1-276 0.03 OrthoFinder output from all 47 species
Dcu_g25280 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18506 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007191001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028243001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
GSVIVT01038111001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
GSVIVT01038120001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01038126001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
Gb_03376 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39330.1 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os03g04060.1 LOC_Os03g04060 Chitinase 11 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os05g33130.1 HCHIB, B-CHI,... Chitinase 2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33150.1 HCHIB, B-CHI,... Chitinase 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os06g51060.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39700.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g47568 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15813 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10425967g0010 HCHIB, B-CHI,... Basic endochitinase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
MA_10430424g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_10431378g0020 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10435326g0020 ATEP3, EP3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18470g0020 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.04 OrthoFinder output from all 47 species
MA_191308g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_4970836g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_6093228g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_80085g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.04 OrthoFinder output from all 47 species
Mp2g24440.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Mp4g01780.1 HCHIB, B-CHI,... Endochitinase CH5B OS=Phaseolus vulgaris... 0.02 OrthoFinder output from all 47 species
Mp4g04430.1 HCHIB, B-CHI,... no description available(sp|q949h3|chi1_hevbr : 210.0) 0.03 OrthoFinder output from all 47 species
Pnu_g32706 HCHIB, B-CHI,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57704 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60890 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60891 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g31038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo426710 No alias Endochitinase A OS=Zea mays 0.04 OrthoFinder output from all 47 species
Solyc02g082920.4.1 HCHIB, B-CHI,... Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc04g072000.4.1 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc06g053380.3.1 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc10g055780.1.1 HCHIB, B-CHI,... Endochitinase B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc10g055800.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.06 OrthoFinder output from all 47 species
Zm00001e002252_P001 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e015056_P001 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
Zm00001e030152_P001 HCHIB, B-CHI,... Basic endochitinase A OS=Secale cereale... 0.05 OrthoFinder output from all 47 species
Zm00001e041138_P001 ATEP3, EP3,... Endochitinase B (Fragment) OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0015706 nitrate transmembrane transport RCA Interproscan
BP GO:0050832 defense response to fungus IEP Interproscan
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Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031099 regeneration IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 42 273
No external refs found!