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  5. AT4G01820

AT4G01820 (PGP3, MDR3)


Aliases : PGP3, MDR3

Description : P-glycoprotein 3


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01820
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 ABCB19,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00017p00164980 ATPGP4, PGP4,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00108620 PGP11,... Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.09 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
AMTR_s00049p00128080 evm_27.TU.AmTr_v1... Putative multidrug resistance protein OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00128390 PGP16,... ABC transporter B family member 16 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00128460 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00165440 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT2G47000 ATPGP4, PGP4, ABCB4, MDR4 ATP binding cassette subfamily B4 0.03 OrthoFinder output from all 47 species
AT3G28345 No alias ABC transporter family protein 0.05 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.03 OrthoFinder output from all 47 species
AT3G28380 PGP17 P-glycoprotein 17 0.07 OrthoFinder output from all 47 species
AT3G28415 No alias ABC transporter family protein 0.07 OrthoFinder output from all 47 species
AT3G55320 PGP20 P-glycoprotein 20 0.02 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.11 OrthoFinder output from all 47 species
Adi_g025752 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087061 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105656 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20043 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20821 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39147 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11046 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17861 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33590 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07511 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33230 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24344 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09164 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36046 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38133 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08453.t1 PGP11, Aspi01Gene08453 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12320.t1 PGP2, Aspi01Gene12320 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42791.t1 PGP21, Aspi01Gene42791 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45621.t1 PGP11, Aspi01Gene45621 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52651.t1 PGP2, Aspi01Gene52651 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62055.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62055.t2 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.03 OrthoFinder output from all 47 species
Azfi_s0208.g057960 PGP2 not classified & original description: CDS=388-3987 0.03 OrthoFinder output from all 47 species
Ceric.02G084300.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020952.7 PGP2 ABC transporter B family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g12633 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35627 PGP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35769 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37248 PGP9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40237 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30302 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g44934 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13730 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23811 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01015306001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01017696001 PGP11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_01718 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_02468 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_02469 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_06993 No alias serine carboxypeptidase. subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_08707 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_10215 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_13908 PGP10 ABC transporter B family member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_32487 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
LOC_Os01g35030.1 PGP11, LOC_Os01g35030 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g50070.1 LOC_Os01g50070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17180.1 PGP20, LOC_Os03g17180 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.04 OrthoFinder output from all 47 species
Len_g23455 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46613 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57621 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03498 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_100742g0020 PGP16 ABC transporter B family member 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10134765g0010 PGP11 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_111099g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_114017g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_3448627g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8590327g0010 No alias ABC transporter B family member 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9148200g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp7g04390.1 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Msp_g17749 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26680 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44397 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38310 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56055 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64430 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20355 PGP21 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919 ABCB19,... subfamily ABCB transporter & original description: CDS=118-4143 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899 PGP11 subfamily ABCB transporter & original description: CDS=362-4450 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019194 No alias not classified & original description: CDS=54-1700 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sam_g03287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123915 PGP11 Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
Smo408755 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo419451 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo92485 ABCB19,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc02g087410.4.1 Solyc02g087410 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc03g005860.4.1 PGP11, Solyc03g005860 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc03g122070.3.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Solyc08g076720.4.1 PGP2, Solyc08g076720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc12g098840.3.1 PGP11, Solyc12g098840 subfamily ABCB transporter 0.08 OrthoFinder output from all 47 species
Spa_g06203 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19381 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11244 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38947 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020073_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e025063_P001 Zm00001e025063 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e028117_P001 PGP11, Zm00001e028117 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041008_P003 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0031226 obsolete intrinsic component of plasma membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 369 515
IPR003439 ABC_transporter-like_ATP-bd 1004 1153
IPR011527 ABC1_TM_dom 662 934
IPR011527 ABC1_TM_dom 26 295
No external refs found!