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  5. Pnu_g30609

Pnu_g30609 (ZML2, GATA28, TIFY2A)


Aliases : ZML2, GATA28, TIFY2A

Description : transcription factor *(C-GATA) & original description: none


Gene families : OG0001741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30609

Target Alias Description ECC score Gene Family Method Actions
Aob_g04331 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g03729 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00464 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g47970.1 TIFY2B, ZML1,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Len_g44387 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35783 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10099 No alias transcription factor *(C-GATA) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 208 244
IPR010402 CCT_domain 133 175
IPR010399 Tify_dom 69 99
No external refs found!