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  5. AT4G02800

AT4G02800


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink).


Gene families : OG0001542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02800
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00204600 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.myosin... 0.16 OrthoFinder output from all 47 species
Adi_g011385 No alias myosin adaptor protein *(MadA) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18548 No alias myosin adaptor protein *(MadA) & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g24360 No alias myosin adaptor protein *(MadA) & original description: none 0.09 OrthoFinder output from all 47 species
Als_g03462 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16451 No alias myosin adaptor protein *(MadA) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g16106 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12834 No alias myosin adaptor protein *(MadA) & original description: none 0.17 OrthoFinder output from all 47 species
Aspi01Gene18486.t1 Aspi01Gene18486 myosin adaptor protein *(MadA) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene49282.t1 Aspi01Gene49282 myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000355 No alias myosin adaptor protein *(MadA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G044700.1 Ceric.27G044700 myosin adaptor protein *(MadA) & original description:... 0.11 OrthoFinder output from all 47 species
Dcu_g06833 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011083001 No alias Cytoskeleton.microfilament network.myosin... 0.22 OrthoFinder output from all 47 species
Gb_02819 No alias myosin adaptor protein (MadA) 0.08 OrthoFinder output from all 47 species
LOC_Os04g15800.1 LOC_Os04g15800 myosin adaptor protein (MadA) 0.25 OrthoFinder output from all 47 species
Len_g40909 No alias myosin adaptor protein *(MadA) & original description: none 0.05 OrthoFinder output from all 47 species
MA_84757g0010 No alias myosin adaptor protein (MadA) 0.12 OrthoFinder output from all 47 species
Msp_g10133 No alias myosin adaptor protein *(MadA) & original description: none 0.15 OrthoFinder output from all 47 species
Nbi_g25656 No alias myosin adaptor protein *(MadA) & original description: none 0.15 OrthoFinder output from all 47 species
Sam_g14885 No alias myosin adaptor protein *(MadA) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc06g008980.3.1 Solyc06g008980 myosin adaptor protein (MadA) 0.19 OrthoFinder output from all 47 species
Zm00001e008503_P002 Zm00001e008503 myosin adaptor protein (MadA) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0016572 obsolete histone phosphorylation RCA Interproscan
BP GO:0042127 regulation of cell population proliferation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019187 beta-1,4-mannosyltransferase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035173 histone kinase activity IEP HCCA
MF GO:0035184 histone threonine kinase activity IEP HCCA
MF GO:0035402 histone H3T11 kinase activity IEP HCCA
BP GO:0035407 obsolete histone H3-T11 phosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0051753 mannan synthase activity IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
MF GO:0072354 histone H3T3 kinase activity IEP HCCA
BP GO:0072355 obsolete histone H3-T3 phosphorylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!