Description : C2H2 and C2HC zinc fingers superfamily protein
Gene families : OG0002867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002867_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g16640.1 | LOC_Os02g16640 | component U1C of U1 small nuclear ribonucleoprotein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g008860.3.1 | Solyc06g008860 | component U1C of U1 small nuclear ribonucleoprotein... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25074 | No alias | component *(U1C) of U1 snRNP complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29133 | No alias | component *(U1C) of U1 snRNP complex & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000502 | proteasome complex | IEP | HCCA |
| BP | GO:0001558 | regulation of cell growth | IEP | HCCA |
| CC | GO:0005829 | cytosol | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009965 | leaf morphogenesis | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0022603 | regulation of anatomical structure morphogenesis | IEP | HCCA |
| BP | GO:0022604 | regulation of cell morphogenesis | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| BP | GO:0035966 | response to topologically incorrect protein | IEP | HCCA |
| BP | GO:0040008 | regulation of growth | IEP | HCCA |
| BP | GO:0042023 | DNA endoreduplication | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044786 | cell cycle DNA replication | IEP | HCCA |
| BP | GO:0048638 | regulation of developmental growth | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051510 | regulation of unidimensional cell growth | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051788 | response to misfolded protein | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0080129 | proteasome core complex assembly | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
| BP | GO:1905392 | plant organ morphogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013085 | U1-CZ_Znf_C2H2 | 1 | 38 |
| No external refs found! |
