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  5. AT4G04630

AT4G04630


Description : Protein of unknown function, DUF584


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G04630

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00151940 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g01052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02469 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g54450.1 LOC_Os01g54450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g32810.1 LOC_Os07g32810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g27350.1 LOC_Os10g27350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_5080831g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003978 No alias not classified & original description: CDS=1-753 0.05 OrthoFinder output from all 47 species
Zm00001e004793_P001 Zm00001e004793 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035093_P001 Zm00001e035093 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP HCCA
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010187 negative regulation of seed germination IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010224 response to UV-B IEP HCCA
BP GO:0010232 vascular transport IEP HCCA
BP GO:0010233 phloem transport IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080050 regulation of seed development IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:2000033 regulation of seed dormancy process IEP HCCA
BP GO:2000034 regulation of seed maturation IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 26 168
No external refs found!