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  5. Pnu_g30631

Pnu_g30631 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30631
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.02 OrthoFinder output from all 47 species
Adi_g036754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16765 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001193 No alias not classified & original description: CDS=1-1761 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009385 No alias not classified & original description: CDS=1-2319 0.03 OrthoFinder output from all 47 species
Cba_g11093 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20660 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023860001 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.04 OrthoFinder output from all 47 species
Gb_38292 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Len_g13937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_104937g0010 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
MA_115669g0020 EMB2758 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_118886g0010 CRR22 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
MA_3471g0010 OTP84 RNA editing factor (MEF19) 0.02 OrthoFinder output from all 47 species
MA_3612g0010 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
MA_440697g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
MA_640827g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_742g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Nbi_g04305 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g02794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04505 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15493 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007342 No alias not classified & original description: CDS=1-912 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011780 No alias not classified & original description: CDS=1-2490 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026308 CRR22 ssDNA-binding protein *(OSB) & original description: CDS=95-2287 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0275.g027065 No alias not classified & original description: CDS=1-2244 0.03 OrthoFinder output from all 47 species
Smo26993 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 491 557
IPR046848 E_motif 393 455
IPR002885 Pentatricopeptide_repeat 350 374
IPR002885 Pentatricopeptide_repeat 250 275
IPR002885 Pentatricopeptide_repeat 149 171
IPR046849 Eplus_motif 460 484
IPR002885 Pentatricopeptide_repeat 174 222
IPR002885 Pentatricopeptide_repeat 74 122
IPR002885 Pentatricopeptide_repeat 276 323
No external refs found!