Aliases : DER2.2
Description : DERLIN-2.2
Gene families : OG0003011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003011_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G04860 | |
| Cluster | HCCA: Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00062p00115640 | DER2.2,... | Protein degradation.ER-associated protein degradation... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g082277 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g31868 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g63520.1 | DER2.2, LOC_Os03g63520 | component DFM1 of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01864 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011641_P001 | DER2.2, Zm00001e011641 | component DFM1 of ER-associated protein degradation... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006508 | proteolysis | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000003 | reproduction | IEP | HCCA |
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| CC | GO:0000795 | synaptonemal complex | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| CC | GO:0005712 | chiasma | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0009631 | cold acclimation | IEP | HCCA |
| BP | GO:0009690 | cytokinin metabolic process | IEP | HCCA |
| BP | GO:0009691 | cytokinin biosynthetic process | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | HCCA |
| CC | GO:0032300 | mismatch repair complex | IEP | HCCA |
| CC | GO:0032390 | MutLbeta complex | IEP | HCCA |
| BP | GO:0032504 | multicellular organism reproduction | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
| MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
| BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| MF | GO:0070628 | proteasome binding | IEP | HCCA |
| CC | GO:0099086 | synaptonemal structure | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007599 | DER1 | 12 | 211 |
| No external refs found! |
