AT4G05050 (UBQ11)

Aliases : UBQ11

Description : ubiquitin 11

Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G05050

Target	Alias	Description	ECC score	Gene Family Method
Als_g08097	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Als_g30978	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.02	OrthoFinder output from all 47 species
Als_g33943	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Als_g41833	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09130	RUB1, ATRUB1, NEDD8	RUB ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene54450.t1	Aspi01Gene54450	component *(eL40) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g06086	RUB1, ATRUB1, NEDD8	RUB ubiquitin-fold protein & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g19721	RUB1, ATRUB1, NEDD8	RUB ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g26709	UBQ14	UBQ ubiquitin-fold protein & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g77311	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g79067	UBQ11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.22G046000.1	UBQ7, RUB2,...	not classified & original description: pacid=50614635...	0.04	OrthoFinder output from all 47 species
Ceric.29G037800.1	UBQ3, Ceric.29G037800	UBQ ubiquitin-fold protein & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.29G037900.1	UBQ3, Ceric.29G037900	UBQ ubiquitin-fold protein & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g48344	UBQ14	UBQ ubiquitin-fold protein & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g50341	UBQ14	UBQ ubiquitin-fold protein & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01023471001	UBQ10	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
Gb_07386	UBQ4	ubiquitin-fold protein (UBQ)	0.02	OrthoFinder output from all 47 species
Gb_28249	UBQ4	ubiquitin-fold protein (UBQ)	0.03	OrthoFinder output from all 47 species
LOC_Os04g53620.1	UBQ4, LOC_Os04g53620	ubiquitin-fold protein (UBQ)	0.03	OrthoFinder output from all 47 species
Len_g29367	UBQ14	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23365	UBQ6	component *(eS31) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
MA_41251g0030	UBQ10	ubiquitin-fold protein (UBQ)	0.04	OrthoFinder output from all 47 species
Mp4g02740.1	UBQ10	ubiquitin-fold protein (UBQ)	0.03	OrthoFinder output from all 47 species
Msp_g02683	RUB1, ATRUB1, NEDD8	RUB ubiquitin-fold protein & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g43028	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g02100	RUB1, ATRUB1, NEDD8	RUB ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g36528	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	TAS	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin-like_dom	3	74
IPR000626	Ubiquitin-like_dom	155	226
IPR000626	Ubiquitin-like_dom	79	150

External Links

No external refs found!

AT4G05050 (UBQ11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation