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  5. AT4G05330

AT4G05330 (AGD13)


Aliases : AGD13

Description : ARF-GAP domain 13


Gene families : OG0000461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G05330
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00013660 evm_27.TU.AmTr_v1... Probable ADP-ribosylation factor GTPase-activating... 0.04 OrthoFinder output from all 47 species
AT1G48590 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.08 OrthoFinder output from all 47 species
Adi_g007630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G029100.1 AGD12, ZAC,... not classified & original description: pacid=50638946... 0.03 OrthoFinder output from all 47 species
Ceric.17G001200.1 AGD13, Ceric.17G001200 not classified & original description: pacid=50617251... 0.02 OrthoFinder output from all 47 species
Ceric.17G065800.1 Ceric.17G065800 not classified & original description: pacid=50617300... 0.02 OrthoFinder output from all 47 species
Ceric.20G090500.1 Ceric.20G090500 not classified & original description: pacid=50566467... 0.03 OrthoFinder output from all 47 species
Dde_g04192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02305 AGD12, ZAC not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g72230.1 LOC_Os01g72230 class III ARF-GAP ARF-GTPase-activating protein 0.01 OrthoFinder output from all 47 species
LOC_Os02g10480.6 AGD12, ZAC,... class III ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g01770.1 LOC_Os07g01770 CAR abscisic acid receptor recruitment factor 0.15 OrthoFinder output from all 47 species
LOC_Os09g07800.1 LOC_Os09g07800 Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g05199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18126 AGD12, ZAC not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_68835g0010 No alias Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g04419 AGD12, ZAC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001117 No alias not classified & original description: CDS=269-766 0.03 OrthoFinder output from all 47 species
Solyc03g118710.3.1 Solyc03g118710 CAR abscisic acid receptor recruitment factor 0.01 OrthoFinder output from all 47 species
Solyc06g068940.4.1 Solyc06g068940 CAR abscisic acid receptor recruitment factor 0.07 OrthoFinder output from all 47 species
Solyc12g040800.2.1 Solyc12g040800 CAR abscisic acid receptor recruitment factor 0.02 OrthoFinder output from all 47 species
Zm00001e010435_P001 Zm00001e010435 Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e011574_P001 Zm00001e011574 Protein C2-DOMAIN ABA-RELATED 8 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e015687_P004 AGD12, ZAC,... class III ARF-GAP ARF-GTPase-activating protein 0.04 OrthoFinder output from all 47 species
Zm00001e023402_P004 AGD12, ZAC,... class III ARF-GAP ARF-GTPase-activating protein 0.04 OrthoFinder output from all 47 species
Zm00001e028315_P003 Zm00001e028315 class III ARF-GAP ARF-GTPase-activating protein 0.1 OrthoFinder output from all 47 species
Zm00001e032678_P001 Zm00001e032678 CAR abscisic acid receptor recruitment factor 0.04 OrthoFinder output from all 47 species
Zm00001e032704_P003 Zm00001e032704 CAR abscisic acid receptor recruitment factor 0.04 OrthoFinder output from all 47 species
Zm00001e035048_P001 Zm00001e035048 Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009555 pollen development IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040011 locomotion IEP HCCA
MF GO:0042284 sphingolipid delta-4 desaturase activity IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 180 270
IPR001164 ArfGAP_dom 16 131
No external refs found!