AT4G09180

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G09180

Target	Alias	Description	ECC score	Gene Family Method
Als_g08145	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Aob_g31589	RSL4	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0013.g013132	No alias	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Azfi_s0319.g064443	RSL2	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Cba_g17686	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Cba_g77017	PIL1	bHLH-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.04G092700.1	Ceric.04G092700	bHLH-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.11G032200.1	Ceric.11G032200	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Dac_g13389	No alias	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g09172	No alias	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Dde_g08656	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g51490	LRL3	bHLH-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g24826	LRL3	bHLH-type transcription factor & original description: none	0.11	OrthoFinder output from all 47 species
GSVIVT01021032001	No alias	External stimuli response.light.UV-A/blue...	0.11	OrthoFinder output from all 47 species
GSVIVT01032055001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
LOC_Os02g48060.1	RHD6, LOC_Os02g48060	transcription factor (bHLH)	0.07	OrthoFinder output from all 47 species
LOC_Os04g28280.1	LOC_Os04g28280	transcription factor (bHLH). transcriptional regulator (CIB)	0.1	OrthoFinder output from all 47 species
Len_g22408	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g40022	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Msp_g13241	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g01031	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29044	CIB1	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Pir_g18288	SPT	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g04652	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g32176	RSL2	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g14752	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10179	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Zm00001e018946_P001	Zm00001e018946	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	196	241

External Links

No external refs found!

AT4G09180

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation