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  5. AT4G13600

AT4G13600


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G13600
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00035570 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G69295 PDCB4 plasmodesmata callose-binding protein 4 0.05 OrthoFinder output from all 47 species
AT4G09462 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09464 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09465 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09466 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09467 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G63230 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G63250 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0259.g060656 No alias not classified & original description: CDS=357-1106 0.02 OrthoFinder output from all 47 species
Ceric.15G059500.1 Ceric.15G059500 not classified & original description: pacid=50640649... 0.03 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007873001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.03 OrthoFinder output from all 47 species
GSVIVT01021055001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01021386001 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_15010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58555.1 LOC_Os04g58555 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50490.3 LOC_Os05g50490 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g34660.1 PDCB5, LOC_Os06g34660 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8718849g0010 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_9796357g0010 No alias Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62036 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025725 No alias not classified & original description: CDS=1-396 0.04 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo38969 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo59691 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc01g101120.4.1 Solyc01g101120 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc02g071200.4.1 Solyc02g071200 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc03g115200.3.1 PDCB1, Solyc03g115200 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc07g047710.3.1 Solyc07g047710 Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc09g091920.3.1 Solyc09g091920 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc12g098410.2.1 Solyc12g098410 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g50712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010706_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e021782_P001 Zm00001e021782 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.04 OrthoFinder output from all 47 species
Zm00001e022608_P001 Zm00001e022608 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e035487_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e037118_P002 PDCB5, Zm00001e037118 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010067 procambium histogenesis IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 61 130
No external refs found!