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AT4G14300


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G14300
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00200350 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00185510 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G40490 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g008733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g64152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47653.t1 Aspi01Gene47653 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54967.t1 Aspi01Gene54967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008625 No alias not classified & original description: CDS=712-1971 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g026030 No alias not classified & original description: CDS=422-1717 0.03 OrthoFinder output from all 47 species
Cba_g12118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G060600.1 Ceric.35G060600 not classified & original description: pacid=50581737... 0.03 OrthoFinder output from all 47 species
Cre07.g330300 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g03771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33485 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g32654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c26_4470V3.1 Pp3c26_4470 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g06905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007884 No alias not classified & original description: CDS=207-1496 0.03 OrthoFinder output from all 47 species
Sam_g15340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28993 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g01925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030652_P001 Zm00001e030652 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 112 169
IPR000504 RRM_dom 8 69
No external refs found!