AT4G14770 (TCX2, ATTCX2)

Aliases : TCX2, ATTCX2

Description : TESMIN/TSO1-like CXC 2

Gene families : OG0001700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001700_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G14770

Target	Alias	Description	ECC score	Gene Family Method
Als_g14241	TSO1, ATTSO1	TCX/CPP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g47414	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.37G017200.1	TSO1, ATTSO1,...	TCX/CPP-type transcription factor & original...	0.06	OrthoFinder output from all 47 species
Dac_g21027	SOL1	TCX/CPP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08956	TCX2, ATTCX2	TCX/CPP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13047	SOL1	TCX/CPP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017242001	TCX2, ATTCX2	RNA biosynthesis.transcriptional activation.CPP1-like...	0.03	OrthoFinder output from all 47 species
GSVIVT01018021001	TCX2, ATTCX2	RNA biosynthesis.transcriptional activation.CPP1-like...	0.04	OrthoFinder output from all 47 species
GSVIVT01035818001	TCX2, ATTCX2	RNA biosynthesis.transcriptional activation.CPP1-like...	0.03	OrthoFinder output from all 47 species
LOC_Os03g43730.1	TCX2, ATTCX2,...	CPP1-like transcription factor	0.07	OrthoFinder output from all 47 species
MA_15033g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_33846g0010	TCX2, ATTCX2	CPP1-like transcription factor	0.04	OrthoFinder output from all 47 species
Mp2g11520.1	TCX2, ATTCX2	CPP1-like transcription factor	0.02	OrthoFinder output from all 47 species
Nbi_g06810	SOL1	TCX/CPP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g38475	No alias	TCX/CPP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo443191	SOL1	RNA biosynthesis.transcriptional activation.CPP1-like...	0.04	OrthoFinder output from all 47 species
Tin_g30555	SOL1	TCX/CPP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-templated DNA replication	RCA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042127	regulation of cell population proliferation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005172	CRC	460	496
IPR005172	CRC	375	410

External Links

No external refs found!

AT4G14770 (TCX2, ATTCX2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation