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  5. AT4G15320

AT4G15320 (CSLB06, ATCSLB6, ATCSLB06)


Aliases : CSLB06, ATCSLB6, ATCSLB06

Description : cellulose synthase-like B6


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15320
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00225060 CSLB04, ATCSLB4,... Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT4G15290 ATCSLB05, CSLB05, ATCSLB5 Cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
Ala_g38531 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Als_g34036 IXR1, CEV1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03236 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30179.t1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30569.t1 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Cba_g04692 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Cba_g07717 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ceric.09G024100.1 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dac_g30499 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Dac_g34792 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g04030 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ehy_g05085 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26383 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ehy_g27936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002911001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01007043001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01014703001 ATCSLE1, CSLE1 Cellulose synthase-like protein E1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030464001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01030467001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Gb_03770 CESA5 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Gb_06082 MUR10, ATCESA7,... Cellulose synthase A catalytic subunit 9 [UDP-forming]... 0.03 OrthoFinder output from all 47 species
LOC_Os07g36630.1 ATCSLD5, CSLD5,... D-glucan synthase (CSLF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g20260.1 ATCSLD3, KJK,... Probable mixed-linked glucan synthase 7 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os10g42750.1 ATCSLD3, KJK,... mannan synthase (CSLD) 0.04 OrthoFinder output from all 47 species
MA_264460g0010 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Mp2g05670.1 ATCSLD3, KJK, CSLD3 catalytic component CesA of cellulose synthase complex.... 0.03 OrthoFinder output from all 47 species
Ore_g37613 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22229 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ppi_g30689 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Smo230382 ATCSLD3, KJK, CSLD3 Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.07 OrthoFinder output from all 47 species
Solyc04g072790.2.1 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Solyc07g005840.2.1 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Solyc07g065660.4.1 ATCSLE1, CSLE1,... Cellulose synthase-like protein E1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g072820.4.1 CESA4, NWS2,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Spa_g01345 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Spa_g49131 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Zm00001e004740_P001 ATCSLD3, KJK,... Probable mixed-linked glucan synthase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0016740 transferase activity ISS Interproscan
MF GO:0016757 glycosyltransferase activity ISS Interproscan
MF GO:0016759 cellulose synthase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0010232 vascular transport IEP HCCA
BP GO:0010233 phloem transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 466 653
IPR005150 Cellulose_synth 95 323
No external refs found!