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  5. AT4G15620

AT4G15620


Description : Uncharacterised protein family (UPF0497)


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15620
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.06 OrthoFinder output from all 47 species
AMTR_s00016p00177260 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.07 OrthoFinder output from all 47 species
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.05 OrthoFinder output from all 47 species
AT1G14160 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.08 OrthoFinder output from all 47 species
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01010992001 No alias CASP-like protein 1E1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.08 OrthoFinder output from all 47 species
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.09 OrthoFinder output from all 47 species
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
Gb_11697 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Gb_12159 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Gb_12162 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
Gb_26814 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
LOC_Os01g13560.1 LOC_Os01g13560 CASP-like protein 1C1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os02g36845.1 LOC_Os02g36845 Casparian strip membrane protein 7 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os04g38690.1 LOC_Os04g38690 Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58760.1 LOC_Os04g58760 Casparian strip membrane protein 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os06g12500.1 LOC_Os06g12500 Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os12g41690.1 LOC_Os12g41690 CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
MA_64798g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.02 OrthoFinder output from all 47 species
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
MA_90653g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g067300.3.1 Solyc01g067300 CASP-like protein 1D1 OS=Populus trichocarpa... 0.03 OrthoFinder output from all 47 species
Solyc02g069730.3.1 Solyc02g069730 CASP-like protein 1B1 OS=Ricinus communis... 0.06 OrthoFinder output from all 47 species
Solyc03g097720.4.1 Solyc03g097720 CASP-like protein 1F1 OS=Vitis vinifera... 0.06 OrthoFinder output from all 47 species
Zm00001e003216_P001 Zm00001e003216 CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) 0.03 OrthoFinder output from all 47 species
Zm00001e006491_P001 Zm00001e006491 Casparian strip membrane protein 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e009346_P001 Zm00001e009346 CASP-like protein 1D1 OS=Zea mays (sp|b6u361|cspl3_maize : 309.0) 0.02 OrthoFinder output from all 47 species
Zm00001e015806_P001 Zm00001e015806 Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.05 OrthoFinder output from all 47 species
Zm00001e021080_P001 Zm00001e021080 CASP-like protein 1U4 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species
Zm00001e026902_P001 Zm00001e026902 CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 25 177
No external refs found!