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  5. AT4G15830

AT4G15830


Description : ARM repeat superfamily protein


Gene families : OG0001508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15830

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00213010 evm_27.TU.AmTr_v1... No description available 0.12 OrthoFinder output from all 47 species
Als_g33184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18559 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g010494 No alias not classified & original description: CDS=698-1747 0.04 OrthoFinder output from all 47 species
Ceric.33G045600.1 Ceric.33G045600 not classified & original description: pacid=50606932... 0.02 OrthoFinder output from all 47 species
Dac_g08508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017734001 No alias No description available 0.25 OrthoFinder output from all 47 species
Gb_18598 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os01g70560.1 LOC_Os01g70560 no hits & (original description: none) 0.21 OrthoFinder output from all 47 species
Len_g00468 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g27479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44976 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080750.3.1 Solyc01g080750 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Spa_g55753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028379_P001 Zm00001e028379 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
BP GO:0051225 spindle assembly RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0010376 stomatal complex formation IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 96 266
No external refs found!