AT4G17090 (BMY8, BAM3, CT-BMY)

Aliases : BMY8, BAM3, CT-BMY

Description : chloroplast beta-amylase

Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G17090
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00050p00205080	BAM1, BMY7,...	Carbohydrate metabolism.starch...	0.04	OrthoFinder output from all 47 species
Adi_g024852	BMY5, BAM6	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082770	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01455	BMY5, BAM6	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g03909	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g05070	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06607	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g18488	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g15788	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12842	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0319.g064428	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: CDS=328-2121	0.03	OrthoFinder output from all 47 species
Ceric.19G057400.1	BAM1, BMY7,...	EC_3.2 glycosylase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g10032	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g13700	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27805	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g05980	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os10g41550.1	BMY8, BAM3,...	beta amylase	0.03	OrthoFinder output from all 47 species
Len_g08375	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Len_g10304	BMY5, BAM6	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g19095	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g20100	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g22821	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
MA_124514g0010	BAM1, BMY7, TR-BAMY	beta amylase	0.04	OrthoFinder output from all 47 species
Msp_g13123	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g14099	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g12697	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	None	Extended
BP	GO:0000024	maltose biosynthetic process	IMP	Interproscan
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005983	starch catabolic process	IMP	Interproscan
BP	GO:0005983	starch catabolic process	TAS	Interproscan
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009312	oligosaccharide biosynthetic process	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IDA	Interproscan
MF	GO:0016161	beta-amylase activity	ISS	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044247	cellular polysaccharide catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044275	cellular carbohydrate catabolic process	None	Extended
BP	GO:0046351	disaccharide biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0004310	farnesyl-diphosphate farnesyltransferase activity	IEP	HCCA
MF	GO:0004311	farnesyltranstransferase activity	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008320	protein transmembrane transporter activity	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
CC	GO:0009527	plastid outer membrane	IEP	HCCA
CC	GO:0009707	chloroplast outer membrane	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010039	response to iron ion	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015450	protein-transporting ATPase activity	IEP	HCCA
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	HCCA
MF	GO:0030570	pectate lyase activity	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
MF	GO:0035250	UDP-galactosyltransferase activity	IEP	HCCA
BP	GO:0045037	protein import into chloroplast stroma	IEP	HCCA
MF	GO:0047216	inositol 3-alpha-galactosyltransferase activity	IEP	HCCA
BP	GO:0055072	iron ion homeostasis	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
MF	GO:0140318	protein transporter activity	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	89	506

External Links

No external refs found!

AT4G17090 (BMY8, BAM3, CT-BMY)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation