AT4G17540


Description : unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0008359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008359_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17540

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00201330 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Aev_g11851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g015953 No alias not classified & original description: CDS=149-859 0.05 OrthoFinder output from all 47 species
Dcu_g13956 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g03210.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g02806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g060890.4.1 Solyc06g060890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP HCCA
BP GO:0016032 viral process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044001 migration in host IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!